STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOD01192.1L-serine dehydratase, alpha subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family. (290 aa)    
Predicted Functional Partners:
EOD01191.1
L-serine dehydratase, beta subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family.
 
 0.999
EOD01381.1
Serine hydroxymethyltransferase.
  
 
 0.936
EOD00076.1
Serine acetyltransferase.
     
 0.835
EOD01800.1
Serine--pyruvate aminotransferase.
    
 0.802
EOD01099.1
Phosphoglycerate mutase.
    
  0.761
EOD00389.1
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
    
  0.761
EOC99688.1
Hypothetical protein.
    
  0.638
EOD01740.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.561
EOD01545.1
Cystathionine gamma-lyase.
     
 0.551
EOD00594.1
Threonine synthase.
  
 
 0.533
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.