STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOD01168.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
EOD00424.1
Pyruvate-flavodoxin oxidoreductase.
    
  0.792
EOC99576.1
Pyruvate-flavodoxin oxidoreductase.
    
  0.792
EOD01169.1
Hypothetical protein.
       0.646
EOD00493.1
Transcriptional regulator.
    
  0.519
EOD00846.1
GCN5-related N-acetyltransferase.
 
  
 0.483
EOD00140.1
Hypothetical protein.
  
  
  0.465
EOD00594.1
Threonine synthase.
 
  
 0.437
EOD01170.1
Transcriptional regulator DegU, LuxR family.
       0.435
EOD01167.1
Pyruvate formate-lyase.
       0.427
EOD01166.1
Pyruvate formate-lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
       0.413
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.