STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOD00938.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
EOD00937.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
 
 0.939
EOD00939.1
Hypothetical protein.
 
     0.887
EOD00936.1
Hypothetical protein.
 
    0.886
EOD00082.1
RNA polymerase sporulation specific sigma factor SigH; Belongs to the sigma-70 factor family.
  
 
 0.700
EOC99993.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
 0.700
EOC99854.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.700
EOC99488.1
Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.700
EOC99404.1
Putative sigma factor.
  
 
 0.700
EOD01408.1
Hypothetical protein.
  
 
 0.688
EOC99564.1
ABC-2 type transporter.
  
     0.539
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.