STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOD00649.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
EOC99668.1
Lead, cadmium, zinc and mercury transporting ATPase / Copper-translocating P-type ATPase.
  
  
 0.711
EOD00650.1
Hypothetical protein.
       0.692
EOD00648.1
Hypothetical protein.
  
    0.617
EOD00651.1
HesA/MoeB/ThiF family protein; Related to EC-YgdL.
       0.610
EOC99716.1
Flagellar motor switch protein FliN.
    
   0.600
aspS
Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.588
EOD00063.1
Heavy-metal binding protein.
  
  
 0.588
hisS
Histidyl-tRNA synthetase.
       0.586
EOD00656.1
Hydroxyacylglutathione hydrolase.
     
 0.506
EOD00654.1
Putative radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent.
       0.504
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.