Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EOD00281.1 | EOD00284.1 | L21TH_1684 | L21TH_1687 | Hypothetical protein. | Putative cell wall-binding protein. | 0.619 |
| EOD00281.1 | rnmV | L21TH_1684 | L21TH_1686 | Hypothetical protein. | Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.586 |
| EOD00281.1 | rsmA | L21TH_1684 | L21TH_1685 | Hypothetical protein. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.619 |
| EOD00284.1 | EOD00281.1 | L21TH_1687 | L21TH_1684 | Putative cell wall-binding protein. | Hypothetical protein. | 0.619 |
| EOD00284.1 | EOD00518.1 | L21TH_1687 | L21TH_1433 | Putative cell wall-binding protein. | Putative deoxyribonuclease YcfH. | 0.637 |
| EOD00284.1 | EOD00796.1 | L21TH_1687 | L21TH_1167 | Putative cell wall-binding protein. | Peptidoglycan-binding LysM. | 0.530 |
| EOD00284.1 | EOD00911.1 | L21TH_1687 | L21TH_1019 | Putative cell wall-binding protein. | Hypothetical protein. | 0.620 |
| EOD00284.1 | EOD01264.1 | L21TH_1687 | L21TH_0618 | Putative cell wall-binding protein. | Division initiation protein. | 0.523 |
| EOD00284.1 | EOD01738.1 | L21TH_1687 | L21TH_0177 | Putative cell wall-binding protein. | Hypothetical protein. | 0.946 |
| EOD00284.1 | EOD01843.1 | L21TH_1687 | L21TH_0072 | Putative cell wall-binding protein. | Peptidase family M23/M37. | 0.533 |
| EOD00284.1 | ispE | L21TH_1687 | L21TH_0232 | Putative cell wall-binding protein. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.783 |
| EOD00284.1 | rnmV | L21TH_1687 | L21TH_1686 | Putative cell wall-binding protein. | Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.848 |
| EOD00284.1 | rsmA | L21TH_1687 | L21TH_1685 | Putative cell wall-binding protein. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.909 |
| EOD00518.1 | EOD00284.1 | L21TH_1433 | L21TH_1687 | Putative deoxyribonuclease YcfH. | Putative cell wall-binding protein. | 0.637 |
| EOD00518.1 | rnmV | L21TH_1433 | L21TH_1686 | Putative deoxyribonuclease YcfH. | Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.541 |
| EOD00518.1 | rsmA | L21TH_1433 | L21TH_1685 | Putative deoxyribonuclease YcfH. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.894 |
| EOD00796.1 | EOD00284.1 | L21TH_1167 | L21TH_1687 | Peptidoglycan-binding LysM. | Putative cell wall-binding protein. | 0.530 |
| EOD00911.1 | EOD00284.1 | L21TH_1019 | L21TH_1687 | Hypothetical protein. | Putative cell wall-binding protein. | 0.620 |
| EOD01264.1 | EOD00284.1 | L21TH_0618 | L21TH_1687 | Division initiation protein. | Putative cell wall-binding protein. | 0.523 |
| EOD01738.1 | EOD00284.1 | L21TH_0177 | L21TH_1687 | Hypothetical protein. | Putative cell wall-binding protein. | 0.946 |
page 1 of 2