STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOD00049.1NADH:ubiquinone oxidoreductase 24 kD subunit. (162 aa)    
Predicted Functional Partners:
EOD00117.1
NAD-reducing hydrogenase subunit HoxF.
 0.999
EOD00048.1
NAD-reducing hydrogenase subunit HoxF.
 0.999
EOC99418.1
NAD-reducing hydrogenase subunit HoxF.
 0.999
EOD00118.1
NADH-quinone oxidoreductase, E subunit.
 
0.998
EOD00047.1
Periplasmic Fe hydrogenase large subunit.
 0.995
EOC99417.1
Periplasmic [Fe] hydrogenase large subunit.
 0.979
EOD00116.1
Periplasmic Fe hydrogenase; Large subunit.
 0.978
rnfB
Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.949
EOD00050.1
Hypothetical protein.
   
 0.940
EOD00175.1
Electron transfer flavoprotein, alpha subunit.
  
 0.920
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.