STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOC99840.1Metal-dependent phosphoesterases (PHP family). (238 aa)    
Predicted Functional Partners:
EOC99841.1
DRTGG domain-containing protein.
 
   
 0.964
EOC99839.1
Sensory transduction histidine kinase.
 
   
 0.953
EOC99842.1
Ferredoxin 2.
 
   
 0.948
EOC99843.1
Anti-sigma B factor RsbT.
 
   
 0.943
EOC99844.1
DRTGG domain-containing protein.
 
   
 0.943
EOC99419.1
Ferredoxin.
 
   
 0.804
EOD00050.1
Hypothetical protein.
 
   
 0.795
EOC99845.1
Hypothetical protein.
       0.576
dinB
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.576
EOC99418.1
NAD-reducing hydrogenase subunit HoxF.
 
   
 0.492
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.