STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOC99762.1Stage III sporulation protein AC. (65 aa)    
Predicted Functional Partners:
EOC99763.1
Stage III sporulation protein AD.
 
  
 0.995
EOC99761.1
Stage III sporulation protein AB.
 
  
 0.987
EOC99764.1
Stage III sporulation protein AE.
 
  
 0.987
EOC99760.1
Stage III sporulation protein AA.
 
  
 0.986
EOC99765.1
Stage III sporulation protein AF.
 
  
 0.968
EOC99766.1
Stage III sporulation protein AG.
 
  
 0.967
EOD01734.1
Stage III sporulation protein AH.
 
  
 0.885
EOD01154.1
Forespore shell protein.
  
  
 0.873
EOD00721.1
Stage III sporulation protein D.
  
  
 0.870
EOD00367.1
Stage II sporulation protein P.
  
  
 0.855
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.