STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOC99414.1Hypothetical protein. (174 aa)    
Predicted Functional Partners:
EOD01799.1
Hypothetical protein.
  
     0.674
EOD01798.1
Cell wall hydrolase / putative cortex lytic enzyme.
  
     0.607
EOC99413.1
Hypothetical protein.
       0.603
EOC99412.1
Fe-S oxidoreductase.
 
     0.585
EOC99411.1
Hypothetical protein.
       0.520
EOD01796.1
Protein-glutamine gamma-glutamyltransferase.
  
     0.498
EOC99410.1
TPR repeat protein.
       0.480
EOD01032.1
Hypothetical protein.
 
     0.425
EOD00735.1
Hypothetical protein.
  
     0.422
EOD01399.1
Spore cortex-lytic enzyme, lytic transglycosylase SleB.
  
     0.421
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.