STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOC99285.1Late competence protein ComEC, DNA transport. (823 aa)    
Predicted Functional Partners:
EOC99286.1
DNA polymerase III delta subunit.
 
   
 0.935
EOC99398.1
Phosphoribosyltransferase.
 
  
 0.922
EOC99315.1
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake.
 
  
 0.887
EOC99801.1
Late competence protein ComEA, DNA receptor.
 
  
 0.880
EOD00109.1
Leader peptidase (Prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.841
EOD00111.1
Type IV fimbrial assembly protein PilC.
  
  
 0.831
EOD00750.1
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake.
 
  
 0.814
cinA
Protein Implicated in DNA repair function with RecA and MutS; Belongs to the CinA family.
     
 0.809
EOD01363.1
Late competence protein ComEC, DNA transport.
 
   
0.775
EOD00113.1
Type IV fimbrial assembly, ATPase PilB.
  
  
 0.762
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
Server load: low (30%) [HD]