STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOC99256.1Anti-sigma-factor antagonist. (100 aa)    
Predicted Functional Partners:
EOC99441.1
Serine-protein kinase rsbW.
 
 0.984
EOD01736.1
Sensory box protein.
  
 
 0.971
EOC99266.1
DNA-binding response regulator.
  
 
  0.956
EOC99268.1
Multi-sensor hybrid histidine kinase.
 
 
 0.956
EOC99254.1
Multi-sensor signal transduction histidine kinase.
 
 0.947
EOC99234.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.941
EOC99267.1
Two-component hybrid sensor and regulator.
  
 
 0.941
EOD00484.1
Hypothetical protein.
 
 0.934
EOD01426.1
Metal dependent phosphohydrolase.
  
 0.932
EOC99716.1
Flagellar motor switch protein FliN.
  
   0.931
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.