STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKD38480.1COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (236 aa)    
Predicted Functional Partners:
AKD37813.1
Sensor histidine kinase-like protein; COG0642 Signal transduction histidine kinase.
 
 
 0.999
AKD39206.1
PhoR protein; COG0642 Signal transduction histidine kinase.
 
 
 0.847
cpxA
Two-component sensor protein; COG0642 Signal transduction histidine kinase.
 
   0.839
AKD38484.1
Sensor protein QseC; COG0642 Signal transduction histidine kinase.
 
 
 0.807
proQ
ProP expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
    0.595
AKD37598.1
Protein TTrS; COG0642 Signal transduction histidine kinase.
 
 
 0.578
AKD37599.1
Hypothetical protein; COG4566 Response regulator.
 
   
 0.529
AKD38209.1
COG3082 Uncharacterized protein conserved in bacteria; Belongs to the UPF0352 family.
 
     0.505
AKD38873.1
NarP protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.497
seqA
Replication initiation regulator SeqA; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
  
    0.494
Your Current Organism:
Pasteurella multocida OH4807
NCBI taxonomy Id: 1304873
Other names: P. multocida subsp. multocida OH4807, Pasteurella multocida subsp. multocida OH4807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.