STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526375_02249Unannotated protein. (449 aa)    
Predicted Functional Partners:
GCA_000526375_02250
Unannotated protein.
 
  
 0.969
GCA_000526375_02248
Unannotated protein.
       0.765
GCA_000526375_02724
Unannotated protein.
 
  
 0.504
GCA_000526375_02725
Unannotated protein.
 
  
 0.490
GCA_000526375_02242
Unannotated protein.
       0.487
GCA_000526375_02244
Unannotated protein.
       0.487
GCA_000526375_02243
Unannotated protein.
       0.480
GCA_000526375_02245
Unannotated protein.
       0.473
GCA_000526375_02241
Unannotated protein.
       0.472
GCA_000526375_02246
Unannotated protein.
       0.472
Your Current Organism:
Aminiphilus circumscriptus
NCBI taxonomy Id: 1304874
Other names: A. circumscriptus DSM 16581, Aminiphilus circumscriptus DSM 16581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.