STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526375_02400Unannotated protein. (422 aa)    
Predicted Functional Partners:
GCA_000526375_02402
Unannotated protein.
  
  0.929
GCA_000526375_02401
Unannotated protein.
   
 0.913
GCA_000526375_02399
Unannotated protein.
       0.678
GCA_000526375_02196
Unannotated protein.
 
     0.662
GCA_000526375_01173
Unannotated protein.
   
 0.607
GCA_000526375_02195
Unannotated protein.
 
     0.585
GCA_000526375_00671
Unannotated protein.
  
  0.540
GCA_000526375_02193
Unannotated protein.
 
    0.523
GCA_000526375_00106
Unannotated protein.
 
 
  0.520
GCA_000526375_00258
Unannotated protein.
 
     0.517
Your Current Organism:
Aminiphilus circumscriptus
NCBI taxonomy Id: 1304874
Other names: A. circumscriptus DSM 16581, Aminiphilus circumscriptus DSM 16581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.