STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526995_02620Unannotated protein. (557 aa)    
Predicted Functional Partners:
GCA_000526995_05696
Unannotated protein.
  
 0.791
GCA_000526995_02529
Unannotated protein.
  
     0.756
GCA_000526995_00375
Unannotated protein.
  
     0.744
GCA_000526995_01154
Unannotated protein.
  
 
 0.721
GCA_000526995_00447
Unannotated protein.
  
   
 0.707
GCA_000526995_01146
Unannotated protein.
  
     0.706
GCA_000526995_02502
Unannotated protein.
  
     0.697
GCA_000526995_01156
Unannotated protein.
  
     0.693
GCA_000526995_01646
Unannotated protein.
  
  
 0.692
GCA_000526995_03051
Unannotated protein.
  
     0.690
Your Current Organism:
Clostridium indolis
NCBI taxonomy Id: 1304881
Other names: Clostridium indolis DSM 755, [. indolis DSM 755, [Clostridium] indolis DSM 755
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