STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620305_00285Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000620305_00283
Unannotated protein.
  
  
 0.919
GCA_000620305_00284
Unannotated protein.
       0.840
GCA_000620305_00282
Unannotated protein.
  
  
 0.751
GCA_000620305_00281
Unannotated protein.
  
  
 0.708
GCA_000620305_00279
Unannotated protein.
  
  
 0.687
GCA_000620305_00286
Unannotated protein.
       0.687
GCA_000620305_00280
Unannotated protein.
     
 0.677
GCA_000620305_00272
Unannotated protein.
 
    0.638
GCA_000620305_00288
Unannotated protein.
       0.529
GCA_000620305_00291
Unannotated protein.
     
 0.514
Your Current Organism:
Desulfitibacter alkalitolerans
NCBI taxonomy Id: 1304884
Other names: D. alkalitolerans DSM 16504, Desulfitibacter alkalitolerans DSM 16504
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.