STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620305_01002Unannotated protein. (290 aa)    
Predicted Functional Partners:
GCA_000620305_01001
Unannotated protein.
  
  
 0.978
GCA_000620305_01000
Unannotated protein.
  
 0.934
GCA_000620305_00533
Unannotated protein.
   
 
 0.906
GCA_000620305_01003
Unannotated protein.
       0.824
GCA_000620305_03866
Unannotated protein.
    
 0.638
GCA_000620305_01004
Unannotated protein.
       0.603
GCA_000620305_00999
Unannotated protein.
       0.597
GCA_000620305_02419
Unannotated protein.
 
   
 0.594
GCA_000620305_01035
Unannotated protein.
 
  
 0.592
GCA_000620305_03237
Unannotated protein.
 
  
 0.583
Your Current Organism:
Desulfitibacter alkalitolerans
NCBI taxonomy Id: 1304884
Other names: D. alkalitolerans DSM 16504, Desulfitibacter alkalitolerans DSM 16504
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.