STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620305_01318Unannotated protein. (161 aa)    
Predicted Functional Partners:
GCA_000620305_00588
Unannotated protein.
  
  
 0.913
GCA_000620305_01317
Unannotated protein.
       0.723
GCA_000620305_03072
Unannotated protein.
 
 
 0.700
GCA_000620305_01319
Unannotated protein.
       0.592
GCA_000620305_01316
Unannotated protein.
       0.576
GCA_000620305_01314
Unannotated protein.
     
 0.571
GCA_000620305_01315
Unannotated protein.
       0.525
GCA_000620305_01320
Unannotated protein.
       0.463
GCA_000620305_00019
Unannotated protein.
 
     0.446
GCA_000620305_00589
Unannotated protein.
  
    0.442
Your Current Organism:
Desulfitibacter alkalitolerans
NCBI taxonomy Id: 1304884
Other names: D. alkalitolerans DSM 16504, Desulfitibacter alkalitolerans DSM 16504
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.