STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620305_02280Unannotated protein. (153 aa)    
Predicted Functional Partners:
GCA_000620305_02279
Unannotated protein.
 
     0.805
GCA_000620305_01291
Unannotated protein.
  
  
 0.647
GCA_000620305_02278
Unannotated protein.
 
    
0.560
GCA_000620305_01367
Unannotated protein.
  
     0.524
GCA_000620305_00965
Unannotated protein.
 
     0.513
GCA_000620305_02281
Unannotated protein.
       0.501
GCA_000620305_00520
Unannotated protein.
  
  
 0.496
GCA_000620305_03195
Unannotated protein.
     
 0.491
GCA_000620305_00249
Unannotated protein.
     
 0.438
GCA_000620305_02836
Unannotated protein.
   
 
 0.431
Your Current Organism:
Desulfitibacter alkalitolerans
NCBI taxonomy Id: 1304884
Other names: D. alkalitolerans DSM 16504, Desulfitibacter alkalitolerans DSM 16504
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.