STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620305_03162Unannotated protein. (127 aa)    
Predicted Functional Partners:
GCA_000620305_01383
Unannotated protein.
 
 0.999
GCA_000620305_00260
Unannotated protein.
    
 0.850
GCA_000620305_00331
Unannotated protein.
   
    0.728
GCA_000620305_00349
Unannotated protein.
   
    0.728
GCA_000620305_03575
Unannotated protein.
  
 
 0.695
GCA_000620305_03161
Unannotated protein.
     
 0.669
GCA_000620305_03164
Unannotated protein.
    
  0.659
GCA_000620305_03160
Unannotated protein.
  
    0.554
GCA_000620305_03163
Unannotated protein.
    
  0.551
GCA_000620305_01384
Unannotated protein.
 
  
 0.524
Your Current Organism:
Desulfitibacter alkalitolerans
NCBI taxonomy Id: 1304884
Other names: D. alkalitolerans DSM 16504, Desulfitibacter alkalitolerans DSM 16504
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.