STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620305_04242Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_000620305_04243
Unannotated protein.
  
 0.965
GCA_000620305_04238
Unannotated protein.
 
    0.909
GCA_000620305_04240
Unannotated protein.
 
    0.846
GCA_000620305_04241
Unannotated protein.
  
  
 0.841
GCA_000620305_04239
Unannotated protein.
       0.766
GCA_000620305_04237
Unannotated protein.
  
    0.707
GCA_000620305_03919
Unannotated protein.
  
  
 0.632
GCA_000620305_02081
Unannotated protein.
      0.627
GCA_000620305_02079
Unannotated protein.
      0.499
GCA_000620305_04245
Unannotated protein.
 
    0.498
Your Current Organism:
Desulfitibacter alkalitolerans
NCBI taxonomy Id: 1304884
Other names: D. alkalitolerans DSM 16504, Desulfitibacter alkalitolerans DSM 16504
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.