STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421285_02225Unannotated protein. (300 aa)    
Predicted Functional Partners:
GCA_000421285_02224
Unannotated protein.
 
     0.929
GCA_000421285_04569
Unannotated protein.
    
  0.826
GCA_000421285_03048
Unannotated protein.
   
 0.656
GCA_000421285_02160
Unannotated protein.
      0.651
GCA_000421285_02597
Unannotated protein.
 
   
 0.619
GCA_000421285_02222
Unannotated protein.
 
     0.607
GCA_000421285_02664
Unannotated protein.
    
  0.605
GCA_000421285_00994
Unannotated protein.
   
 
  0.589
GCA_000421285_01276
Unannotated protein.
   
 
  0.589
GCA_000421285_04681
Unannotated protein.
   
 
 0.588
Your Current Organism:
Desulfotignum balticum
NCBI taxonomy Id: 1304886
Other names: D. balticum DSM 7044, Desulfotignum balticum DSM 7044
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.