STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421105_00040Unannotated protein. (212 aa)    
Predicted Functional Partners:
GCA_000421105_00455
Unannotated protein.
  
  
  0.823
GCA_000421105_00332
Unannotated protein.
    
 0.784
GCA_000421105_00038
Unannotated protein.
       0.773
GCA_000421105_00039
Unannotated protein.
       0.773
GCA_000421105_01866
Unannotated protein.
    
 0.762
GCA_000421105_02668
Unannotated protein.
  
 
  0.761
GCA_000421105_02667
Unannotated protein.
   
 
  0.746
GCA_000421105_01158
Unannotated protein.
    
  0.743
GCA_000421105_02707
Unannotated protein.
  
 
 0.714
GCA_000421105_00369
Unannotated protein.
  
  
 
0.644
Your Current Organism:
Geovibrio sp. L21AceBES
NCBI taxonomy Id: 1304888
Other names: G. sp. L21-Ace-BES, Geovibrio sp. L21-Ace-BES
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.