STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421105_02075Unannotated protein. (316 aa)    
Predicted Functional Partners:
GCA_000421105_02076
Unannotated protein.
 
     0.829
GCA_000421105_02034
Unannotated protein.
 
 
 0.827
GCA_000421105_02077
Unannotated protein.
 
   
 0.813
GCA_000421105_01523
Unannotated protein.
  
 
 0.809
GCA_000421105_01522
Unannotated protein.
 
 
 0.782
GCA_000421105_02074
Unannotated protein.
       0.777
GCA_000421105_02628
Unannotated protein.
 
 
 0.752
GCA_000421105_00429
Unannotated protein.
   
 
  0.688
GCA_000421105_00781
Unannotated protein.
  
 
 0.610
GCA_000421105_02069
Unannotated protein.
  
 
 0.607
Your Current Organism:
Geovibrio sp. L21AceBES
NCBI taxonomy Id: 1304888
Other names: G. sp. L21-Ace-BES, Geovibrio sp. L21-Ace-BES
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.