STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF08840.1Diguanylate cyclase (GGDEF) domain-containing protein. (448 aa)    
Predicted Functional Partners:
SMF46969.1
PAS domain S-box-containing protein.
 
 0.955
SMF14744.1
Signal transduction histidine kinase.
 0.943
SMF23243.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 0.893
SMF28877.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.868
SMF08845.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
    
0.800
SMF20263.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
0.787
SMF63145.1
GAF sensor signal transduction histidine kinase.
 
   
  0.777
SMF11609.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.760
SMF35931.1
Two-component system, NarL family, sensor histidine kinase BarA.
 0.756
SMF08421.1
Signal transduction histidine kinase.
 0.749
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.