STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF15662.1Uncharacterized membrane protein YckC, RDD family. (168 aa)    
Predicted Functional Partners:
SMF60266.1
PilZ domain-containing protein.
  
     0.614
SMF36239.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.604
SMF15668.1
Predicted lactoylglutathione lyase.
       0.551
SMF61099.1
Heat shock protein Hsp15; Belongs to the HSP15 family.
   
    0.505
SMF24332.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.453
SMF48113.1
FecR family protein.
  
     0.418
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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