Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SMF14986.1 | SMF17938.1 | SAMN02745866_00971 | SAMN02745866_01185 | DNA protecting protein DprA. | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | 0.477 |
SMF14986.1 | SMF17950.1 | SAMN02745866_00971 | SAMN02745866_01186 | DNA protecting protein DprA. | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | 0.477 |
SMF17928.1 | SMF17938.1 | SAMN02745866_01184 | SAMN02745866_01185 | Hypothetical protein. | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | 0.540 |
SMF17928.1 | SMF17950.1 | SAMN02745866_01184 | SAMN02745866_01186 | Hypothetical protein. | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | 0.540 |
SMF17938.1 | SMF14986.1 | SAMN02745866_01185 | SAMN02745866_00971 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | DNA protecting protein DprA. | 0.477 |
SMF17938.1 | SMF17928.1 | SAMN02745866_01185 | SAMN02745866_01184 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Hypothetical protein. | 0.540 |
SMF17938.1 | SMF17950.1 | SAMN02745866_01185 | SAMN02745866_01186 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | 0.916 |
SMF17938.1 | SMF24288.1 | SAMN02745866_01185 | SAMN02745866_01577 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Alkaline phosphatase D. | 0.698 |
SMF17938.1 | dnaK | SAMN02745866_01185 | SAMN02745866_00048 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.645 |
SMF17938.1 | nadK | SAMN02745866_01185 | SAMN02745866_02597 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.701 |
SMF17938.1 | secA | SAMN02745866_01185 | SAMN02745866_00217 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.813 |
SMF17938.1 | secB | SAMN02745866_01185 | SAMN02745866_01410 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Protein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. | 0.788 |
SMF17938.1 | thiE | SAMN02745866_01185 | SAMN02745866_02157 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.884 |
SMF17938.1 | tig | SAMN02745866_01185 | SAMN02745866_01902 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.787 |
SMF17950.1 | SMF14986.1 | SAMN02745866_01186 | SAMN02745866_00971 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | DNA protecting protein DprA. | 0.477 |
SMF17950.1 | SMF17928.1 | SAMN02745866_01186 | SAMN02745866_01184 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Hypothetical protein. | 0.540 |
SMF17950.1 | SMF17938.1 | SAMN02745866_01186 | SAMN02745866_01185 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | 0.916 |
SMF17950.1 | SMF24288.1 | SAMN02745866_01186 | SAMN02745866_01577 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Alkaline phosphatase D. | 0.738 |
SMF17950.1 | dnaK | SAMN02745866_01186 | SAMN02745866_00048 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.645 |
SMF17950.1 | nadK | SAMN02745866_01186 | SAMN02745866_02597 | Alkaline phosphatase; Belongs to the alkaline phosphatase family. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.644 |
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