STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF23459.1Type II transport protein GspH. (191 aa)    
Predicted Functional Partners:
SMF23449.1
Type IV pilus assembly protein PilV.
 
  
 0.952
SMF23435.1
Type IV pilus assembly protein PilW.
 
  
 0.939
SMF23476.1
Type IV pilus assembly protein PilE.
 
  
  0.939
SMF23422.1
Type IV pilus assembly protein PilY1.
 
  
 0.933
SMF23429.1
Type IV pilus assembly protein PilX.
 
  
 0.931
SMF43140.1
Tfp pilus assembly protein, tip-associated adhesin PilY1.
 
  
 0.812
SMF01341.1
Type IV pilus assembly protein PilY1.
 
  
 0.809
SMF43189.1
Type IV pilus assembly protein PilX.
 
  
 0.806
SMF01310.1
Type IV pilus assembly protein PilX.
 
  
 0.804
SMF01292.1
Type IV pilus assembly protein PilV.
 
  
 0.793
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.