STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF23650.1BNR repeat-like domain-containing protein. (388 aa)    
Predicted Functional Partners:
SMF44409.1
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.939
SMF17169.1
Phosphoglucomutase.
   
 
 0.780
SMF17243.1
Lysophospholipase L1.
  
 
  0.745
SMF27479.1
Lysophospholipase L1.
  
 
  0.721
SMF07050.1
TonB-dependent receptor.
  
     0.710
SMF66068.1
Pectate lyase, PelA/Pel-15E family.
  
     0.709
ubiD
4-hydroxy-3-polyprenylbenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.
       0.689
SMF39457.1
Beta-galactosidase GanA.
 
     0.684
SMF17345.1
1,4-alpha-glucan branching enzyme.
  
 
 0.655
SMF21269.1
1,4-alpha-glucan branching enzyme.
  
 
 0.655
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.