STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF27057.1Carbohydrate binding domain-containing protein. (1093 aa)    
Predicted Functional Partners:
SMF16869.1
Cellulase/cellobiase CelA1; Belongs to the glycosyl hydrolase family 6.
 
  
  0.851
SMF57701.1
Cellulase/cellobiase CelA1; Belongs to the glycosyl hydrolase family 6.
 
  
  0.844
SMF05280.1
Processive endocellulase.
  
  
  0.838
SMF64497.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.821
SMF16489.1
Lysophospholipase L1.
 
 
  0.819
SMF08763.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A).
  
 
  0.815
SMF03419.1
Beta-glucanase/Beta-glucan synthetase.
 
  
 0.813
SMF39449.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A).
  
 
  0.813
SMF24414.1
Endoglucanase.
 
  
  0.810
SMF64596.1
Cellulose binding domain-containing protein.
 
  
  0.808
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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