STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF29984.1Biopolymer transport protein ExbB/TolQ. (205 aa)    
Predicted Functional Partners:
SMF30000.1
Biopolymer transport protein ExbD.
 
  0.964
SMF29990.1
Biopolymer transport protein ExbD.
 
  0.962
SMF30010.1
TonB family C-terminal domain-containing protein.
 
  0.953
SMF11647.1
Biopolymer transport protein ExbD.
 
  0.904
SMF41130.1
Biopolymer transport protein ExbD.
 
  0.900
SMF31068.1
Biopolymer transport protein ExbD.
 
 0.897
SMF22059.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
 0.890
SMF11637.1
Hypothetical protein.
 
  0.888
SMF11672.1
Biopolymer transport protein ExbD/TolR.
 
  0.883
SMF41121.1
Hypothetical protein.
  
  0.874
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.