STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF35350.1Transport and Golgi organisation 2. (242 aa)    
Predicted Functional Partners:
SMF35344.1
Hypothetical protein.
 
     0.909
SMF35339.1
DoxX-like family protein.
 
     0.817
SMF54660.1
LruC domain-containing protein.
  
     0.720
SMF35331.1
Hypothetical protein.
 
     0.629
SMF35317.1
Membrane protein DedA, SNARE-associated domain.
 
     0.584
SMF05335.1
Right handed beta helix region.
  
     0.578
SMF59525.1
Capsule assembly protein Wzi.
 
     0.552
SMF23567.1
Plasmid transfer operon, TraF, protein.
  
     0.535
SMF12688.1
Hypothetical protein.
  
     0.533
SMF54642.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
     0.528
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.