STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF39100.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (202 aa)    
Predicted Functional Partners:
SMF56822.1
Acyl transferase domain-containing protein.
    
 0.883
SMF39089.1
Hypothetical protein.
       0.664
SMF39110.1
Hypothetical protein.
       0.664
SMF27399.1
Tryptophan halogenase.
    
 0.619
SMF43342.1
FMN adenylyltransferase; Belongs to the ribF family.
    
  0.608
SMF57694.1
Nitroreductase.
  
 
 0.554
SMF27374.1
Aromatic ring-opening dioxygenase, catalytic subunit, LigB family.
  
 
 0.551
SMF34078.1
Hypothetical protein.
 
 
 0.544
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
    
  0.531
SMF52118.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.514
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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