STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF54984.1Outer membrane transport energization protein ExbB (TC 2.C.1.1.1). (175 aa)    
Predicted Functional Partners:
SMF54977.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
 0.974
SMF54971.1
Outer membrane transport energization protein TonB (TC 2.C.1.1.1).
 
 0.972
SMF22059.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
 0.927
SMF43796.1
Biopolymer transport protein ExbD.
 
  0.925
SMF60338.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
  0.925
SMF55021.1
Protein of unknown function.
 
    0.907
SMF43807.1
Protein TonB.
 
 0.906
SMF54964.1
Tetratricopeptide repeat-containing protein.
 
     0.901
SMF31068.1
Biopolymer transport protein ExbD.
 
 0.880
SMF55010.1
Outer membrane transport energization protein ExbB (TC 2.C.1.1.1).
    
0.863
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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