STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF55010.1Outer membrane transport energization protein ExbB (TC 2.C.1.1.1). (459 aa)    
Predicted Functional Partners:
SMF55021.1
Protein of unknown function.
    0.971
SMF54977.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
 0.963
SMF54971.1
Outer membrane transport energization protein TonB (TC 2.C.1.1.1).
 
 0.962
SMF43796.1
Biopolymer transport protein ExbD.
 
  0.928
SMF60338.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
  0.927
SMF22059.1
Outer membrane transport energization protein ExbD (TC 2.C.1.1.1).
 
 0.925
SMF43807.1
Protein TonB.
 
 0.925
SMF52705.1
TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 0.894
SMF54964.1
Tetratricopeptide repeat-containing protein.
 
     0.879
SMF54984.1
Outer membrane transport energization protein ExbB (TC 2.C.1.1.1).
    
0.863
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.