STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF56156.1Putative ABC transport system permease protein. (385 aa)    
Predicted Functional Partners:
SMF56166.1
Putative ABC transport system ATP-binding protein.
  0.985
SMF56172.1
RND family efflux transporter, MFP subunit.
 
  
  0.944
SMF17450.1
Putative ABC transport system ATP-binding protein.
  0.893
SMF27084.1
Putative ABC transport system ATP-binding protein.
  0.866
SMF24930.1
Putative ABC transport system ATP-binding protein.
  0.864
SMF18091.1
Putative ABC transport system ATP-binding protein.
  0.861
SMF56136.1
Putative ABC transport system permease protein.
 
    
0.860
SMF29149.1
Putative ABC transport system ATP-binding protein.
  0.799
SMF39625.1
Putative ABC transport system ATP-binding protein.
 0.785
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 0.778
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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