STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF58611.1Alpha-glucosidase, glycosyl hydrolase family GH31; Belongs to the glycosyl hydrolase 31 family. (748 aa)    
Predicted Functional Partners:
SMF06844.1
Beta-galactosidase.
 
 
 0.719
rpsF
SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.
   
   0.679
SMF65805.1
Beta-galactosidase GanA.
 
 
 0.661
SMF44194.1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
   
   0.656
rnc
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
   0.653
rplK
LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
 
 0.646
SMF02956.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
   0.642
rpmB
LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.
    
   0.642
rpmG
LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.642
rpmF
LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.
    
   0.642
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.