STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF60818.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
SMF60813.1
Type I secretion C-terminal target domain (VC_A0849 subclass).
 
     0.843
SMF62289.1
ATP-binding cassette, subfamily C, LapB.
 
     0.796
SMF62281.1
Membrane fusion protein, adhesin transport system.
 
     0.791
SMF62300.1
Outer membrane protein, adhesin transport system.
 
     0.782
SMF60828.1
Predicted periplasmic protein.
 
     0.781
SMF60821.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
     0.774
SMF62273.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
     0.536
SMF03640.1
Uncharacterized membrane protein.
  
     0.477
Your Current Organism:
Alteromonadaceae bacterium Bs31
NCBI taxonomy Id: 1304903
Other names: A. bacterium Bs31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.