STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A120E6R0Uncharacterized protein. (500 aa)    
Predicted Functional Partners:
A0A109FI66
Uncharacterized protein.
    
 0.592
A0A109FI37
Uncharacterized protein.
   
 0.565
A0A109FBU1
SKIP_SNW domain-containing protein.
    
  0.544
A0A109FC37
PHD-type domain-containing protein.
    
  0.529
A0A109FC53
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.529
A0A109FJB2
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.529
A0A120E7F9
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.529
A0A109FIM9
Multidrug resistance protein.
    
  0.519
A0A109FBH6
PH domain-containing protein.
    
 0.513
A0A109FCC7
TPR_REGION domain-containing protein.
    
 0.513
Your Current Organism:
Rhodotorula sp. JG1b
NCBI taxonomy Id: 1305733
Other names: R. sp. JG-1b, Rhodotorula sp. JG-1b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.