STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A125PI26Quinate permease; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (550 aa)    
Predicted Functional Partners:
A0A109FAN4
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.460
A0A109FF22
MFS general substrate transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
  
  0.459
A0A109FAR8
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.448
A0A109FM88
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.448
A0A120E6F3
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
 
   
  0.431
A0A109FAP5
Mannose 6-phosphate receptor domain-containing protein.
    
  0.424
Your Current Organism:
Rhodotorula sp. JG1b
NCBI taxonomy Id: 1305733
Other names: R. sp. JG-1b, Rhodotorula sp. JG-1b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.