STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526275_00469Unannotated protein. (384 aa)    
Predicted Functional Partners:
GCA_000526275_01356
Unannotated protein.
  
 0.981
GCA_000526275_00470
Unannotated protein.
 
     0.954
GCA_000526275_01658
Unannotated protein.
  
 
 0.845
GCA_000526275_03131
Unannotated protein.
 
 
 0.767
GCA_000526275_01358
Unannotated protein.
 
 
 0.763
GCA_000526275_03771
Unannotated protein.
 
 
 0.715
GCA_000526275_00471
Unannotated protein.
 
 
 0.662
GCA_000526275_03772
Unannotated protein.
 
    0.611
GCA_000526275_00712
Unannotated protein.
    
 0.583
GCA_000526275_01586
Unannotated protein.
    
 0.583
Your Current Organism:
Oceanicola sp. HL35
NCBI taxonomy Id: 1305735
Other names: O. sp. HL-35, Oceanicola sp. HL-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.