STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000526275_01897Unannotated protein. (269 aa)    
Predicted Functional Partners:
GCA_000526275_02095
Unannotated protein.
 
 
 0.988
GCA_000526275_01983
Unannotated protein.
 
 
 0.969
GCA_000526275_01348
Unannotated protein.
 
 
 0.951
GCA_000526275_02343
Unannotated protein.
 
 
 0.874
GCA_000526275_03019
Unannotated protein.
 
 
 0.874
GCA_000526275_01810
Unannotated protein.
  
    0.855
GCA_000526275_02130
Unannotated protein.
 
  
 0.786
GCA_000526275_01843
Unannotated protein.
  
  
 0.758
GCA_000526275_01895
Unannotated protein.
       0.703
GCA_000526275_01896
Unannotated protein.
       0.703
Your Current Organism:
Oceanicola sp. HL35
NCBI taxonomy Id: 1305735
Other names: O. sp. HL-35, Oceanicola sp. HL-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.