STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
modUnannotated protein. (651 aa)    
Predicted Functional Partners:
res
Unannotated protein.
 
   
 0.957
HLUCCX10_11025
Unannotated protein.
       0.783
HLUCCX10_11015
Unannotated protein.
       0.773
HLUCCX10_11030
Unannotated protein.
       0.773
HLUCCX10_11040
Unannotated protein.
       0.773
HLUCCX10_11045
Unannotated protein.
       0.773
HLUCCX10_11050
Unannotated protein.
       0.613
HLUCCX10_11010
Unannotated protein.
       0.566
lon
Unannotated protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
     
 0.562
sucD
Unannotated protein.
   
    0.471
Your Current Organism:
Algoriphagus marincola HL49
NCBI taxonomy Id: 1305737
Other names: A. marincola HL-49, Algoriphagus marincola HL-49, Hongiella marincola HL-49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.