STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLUCCX10_01845Unannotated protein. (302 aa)    
Predicted Functional Partners:
HLUCCX10_06010
Unannotated protein.
   
 0.950
HLUCCX10_17760
Unannotated protein.
   
 0.950
GCA_000526355_00090
Unannotated protein.
   
 0.941
HLUCCX10_10270
Unannotated protein.
   
 0.941
HLUCCX10_03780
Unannotated protein.
   
 0.941
HLUCCX10_10420
Unannotated protein.
   
 0.941
HLUCCX10_17950
Unannotated protein.
   
 0.941
HLUCCX10_14250
Unannotated protein.
  
 0.934
HLUCCX10_08895
Unannotated protein.
   
 0.930
HLUCCX10_13990
Unannotated protein.
   
0.893
Your Current Organism:
Algoriphagus marincola HL49
NCBI taxonomy Id: 1305737
Other names: A. marincola HL-49, Algoriphagus marincola HL-49, Hongiella marincola HL-49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.