STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLUCCX10_11260Unannotated protein. (189 aa)    
Predicted Functional Partners:
hpnW
Unannotated protein.
 
    0.874
hpnX-2
Unannotated protein.
 
     0.827
HLUCCX10_11270
Unannotated protein.
 
     0.797
HLUCCX10_11255
Unannotated protein.
       0.779
GCA_000526355_00806
Unannotated protein.
  
 
 0.764
hpnX
Unannotated protein.
 
     0.685
nadE
Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.639
HLUCCX10_09615
Unannotated protein.
    
 0.537
HLUCCX10_04820
Unannotated protein.
 
     0.536
HLUCCX10_05345
Unannotated protein.
     
 0.524
Your Current Organism:
Algoriphagus marincola HL49
NCBI taxonomy Id: 1305737
Other names: A. marincola HL-49, Algoriphagus marincola HL-49, Hongiella marincola HL-49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.