STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaZUnannotated protein. (146 aa)    
Predicted Functional Partners:
HLUCCX10_12455
Unannotated protein.
  
     0.563
HLUCCX10_08955
Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
       0.560
nrdB
Unannotated protein.
   
   0.515
HLUCCX10_14610
Unannotated protein.
  
 
  0.452
HLUCCX10_07270
Unannotated protein.
 
 
   0.451
HLUCCX10_02805
Unannotated protein.
  
    0.447
irc3
Unannotated protein.
    
  0.429
HLUCCX10_10260
Unannotated protein.
  
     0.400
Your Current Organism:
Algoriphagus marincola HL49
NCBI taxonomy Id: 1305737
Other names: A. marincola HL-49, Algoriphagus marincola HL-49, Hongiella marincola HL-49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.