STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmuVUnannotated protein. (269 aa)    
Predicted Functional Partners:
hmuU
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
btuC
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.986
hmuT
Unannotated protein.
 
 0.984
hmuS
Unannotated protein.
   
 0.981
HLUCCX10_15520
Unannotated protein.
 
 0.948
btuF
Unannotated protein.
  
 0.934
hmuR
Unannotated protein.
 
    0.845
GCA_000526355_00810
Unannotated protein.
  
 0.807
HLUCCX10_02810
Unannotated protein.
  
 0.807
hmuY
Unannotated protein.
 
     0.735
Your Current Organism:
Algoriphagus marincola HL49
NCBI taxonomy Id: 1305737
Other names: A. marincola HL-49, Algoriphagus marincola HL-49, Hongiella marincola HL-49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.