STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J132_02284Copia protein. (131 aa)    
Predicted Functional Partners:
J132_03316
Copia protein.
  
     0.531
J132_04669
Copia protein.
  
     0.490
J132_07305
Replication factor A protein 2.
    
  0.476
J132_01052
Copia protein.
  
     0.461
J132_04338
Copia protein.
  
     0.455
J132_04337
Copia protein.
  
     0.452
J132_05737
Copia protein.
  
     0.446
J132_10631
Histone acetyltransferase type B subunit 2.
    
  0.424
J132_00835
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.417
J132_06357
DNA repair protein rad16.
    
  0.412
Your Current Organism:
Termitomyces sp. J132
NCBI taxonomy Id: 1306850
Other names: T. sp. J132
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.