STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTA1_2121LEC14B protein. (638 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1.
    
 0.983
CUL4
Cullin-4; Belongs to the cullin family.
    
 0.952
csn-6
COP9 signalosome complex subunit 6.
    
  0.884
NSP1
Nucleoporin NSP1.
    
 0.862
csn-2
COP9 signalosome complex subunit 2.
    
 0.862
csn-3
COP9 signalosome complex subunit 3.
    
  0.861
csn-7a
COP9 signalosome complex subunit 7a.
    
  0.848
Rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.844
ubl1
Ubiquitin-like protein 1.
    
  0.827
csn-4
COP9 signalosome complex subunit 4.
    
  0.814
Your Current Organism:
Colletotrichum tanaceti
NCBI taxonomy Id: 1306861
Other names: BRIP 57314, C. tanaceti, CBS 132693, Colletotrichum sp. MB-2013, Colletotrichum tanaceti M. Barimani et al., 2013, UM01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.