STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC19DNA-directed RNA polymerases I and III subunit RPAC2. (142 aa)    
Predicted Functional Partners:
RPA12
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
  
 0.999
rpb6
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.999
RPB5
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
  
 0.999
RPB8
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.999
RPA43
DNA-directed RNA polymerase I subunit RPA43.
   
 0.999
rpc40
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.999
Polr2l
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
 0.999
rpc25
DNA-directed RNA polymerase III subunit rpc8.
   
 0.998
RPC10
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.998
RPO31
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.998
Your Current Organism:
Colletotrichum tanaceti
NCBI taxonomy Id: 1306861
Other names: BRIP 57314, C. tanaceti, CBS 132693, Colletotrichum sp. MB-2013, Colletotrichum tanaceti M. Barimani et al., 2013, UM01
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